Package: comorbidPGS 0.3.4

comorbidPGS: Assessing Predisposition Between Phenotypes using Polygenic Scores

Using polygenic scores (PGS, or PRS/GRS for binary outcomes), this package allows to investigate shared predisposition between different conditions, and do fast association analysis, export plots and views of the PGS distribution using 'ggplot2' object.

Authors:Vincent Pascat [aut, cre]

comorbidPGS_0.3.4.tar.gz
comorbidPGS_0.3.4.zip(r-4.5)comorbidPGS_0.3.4.zip(r-4.4)comorbidPGS_0.3.4.zip(r-4.3)
comorbidPGS_0.3.4.tgz(r-4.4-any)comorbidPGS_0.3.4.tgz(r-4.3-any)
comorbidPGS_0.3.4.tar.gz(r-4.5-noble)comorbidPGS_0.3.4.tar.gz(r-4.4-noble)
comorbidPGS_0.3.4.tgz(r-4.4-emscripten)comorbidPGS_0.3.4.tgz(r-4.3-emscripten)
comorbidPGS.pdf |comorbidPGS.html✨
comorbidPGS/json (API)

# Install 'comorbidPGS' in R:
install.packages('comorbidPGS', repos = c('https://vp-biostat.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/vp-biostat/comorbidpgs/issues

Datasets:

On CRAN:

3.78 score 3 stars 3 scripts 184 downloads 7 exports 29 dependencies

Last updated 4 months agofrom:987b23ee09. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 14 2024
R-4.5-winOKNov 14 2024
R-4.5-linuxOKNov 14 2024
R-4.4-winOKNov 14 2024
R-4.4-macOKNov 14 2024
R-4.3-winOKNov 14 2024
R-4.3-macOKNov 14 2024

Exports:assocassocplotcentileplotdecileboxplotdensityplotmultiassocmultiphenassoc

Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmennetpillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr